Extended Data Fig. 7: Expression of marker genes and gene signatures in the annotated scRNA-seq data.
From: Universal recording of immune cell interactions in vivo
(A) UMAP plots showing normalized gene expression levels for selected marker genes characteristic of the final annotation clus. (B) Dot plot of marker genes indicating level of expression for each cell type annotation. (C) Dot plot of scores for gene signatures of immune cell types from PanglaoDB62. For both dot plots, dot size indicates the fraction of cells in the population with values greater than 0, dot color represents level of value (Pearson residual normalized expression or gene signature scores for B and C, respectively).
