Extended Data Fig. 6: Predicted cobamide biosynthesis phenotypes in genomes of marine bacteria and their relative abundance in the Atlantic Ocean. | Nature

Extended Data Fig. 6: Predicted cobamide biosynthesis phenotypes in genomes of marine bacteria and their relative abundance in the Atlantic Ocean.

From: Ligand cross-feeding resolves bacterial vitamin B12 auxotrophies

Extended Data Fig. 6

a, Map showing 22 stations (black dots) from 62°S in the Southern Ocean sector to 47°N in the north Atlantic Ocean sampled at 20 m depth during cruises ANTXXVIII/4 and /5 with RV Polarstern. The percentage given along each pie chart represents the proportion of genome-sequenced prokaryotes of the entire prokaryotic community (identified by 16S rRNA gene). The pie chart of every station sampled presents relative proportions of prokaryotes encoding i) the complete B12 biosynthesis pathway (B12 producers; red), ii) corrin ring biosynthesiser (dark red), iii) cobinamide salvagers (lower ligand producers) (pink) iv) prokaryotes identified as B12 non-producers (grey). Stations are overlayed on a map with annual mean concentrations of chlorophyll a at the surface (https://oceandata.sci.gsfc.nasa.gov). b-e, B12 biosynthesis genes of 1,904 genomes of marine bacteria were analyzed and classified into cobamide biosynthesis phenotypes: as described above for a. Presented are relative abundance of b, all analyzed bacteria, c, phyla and classes, d, orders of Alphaproteobacteria and e, orders of Gammaproteobacteria.

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