Extended Data Fig. 6: Annotation of mouse epiAT.
From: Adipose tissue retains an epigenetic memory of obesity after weight loss
a, Cluster markers used to annotate cell clusters of mouse epiAT. b, UMAP visualization representing epiAT samples coloured by predicted cell subtypes from the Emont et al. mouse epididymal AT dataset. Feature plots showing reference mapping scores illustrating how well this dataset maps to the Emont et al. dataset. c, Macrophage subcluster markers. d, UMAP of 16,567 nuclei representing macrophage subclusters. APCs, adipocyte progenitor cells; DCs, dendritic cells; EpiCs, epithelial cells; EndoCs, endothelial cells; FIPs, fibro-inflammatory progenitors; LECs, lymphatic endothelial cells; MastCs, mast cells; MesoCs, mesothelial cells; SMCs, (vascular) smooth muscle cells; NPVMs, non-perivascular macrophages; LAMs, lipid-associated macrophages; PVMs, perivascular macrophages; P-LAMs, proliferating LAMs.
