Extended Data Fig. 3: Phage species diversity and genomes with double variable repeat DGRs.
From: Isolation, engineering and ecology of temperate phages from the human gut
a, Gene sharing network between induced prophage species (solid circles, n = 68) and database representatives (9920). Representatives in translucence and coloured by host phyla when applicable otherwise in grey, except Crassvirales genomes from Yutin et al. 2021 which are highlighted with solid black boarded grey circles31. b, Mean fractional abundance and prevalence of Caudoviricetes phages within gut viromes (1241) shown as in Fig. 2b, but highlighting Crassvirales genomes in large solid grey circles. c, Annotated genome maps of four phage species encoding a second variable repeat (VR) distal from the RT cassette. Genes coloured by PHROG categories and unknown genes in grey. DGR template and variable repeats denoted with black lines.
