Extended Data Fig. 8: Chromosomal anomalies in representative CORE lines.

WGS reads were aligned to the GS7 reference genome and read counts were aggregated in 1 Mb windows. Each row shows one genotype (Supplementary Table 13). Red arrows mark SVs. At least one chromosome in each genotype is affected by large SVs, which are most likely to be deletions, duplications or homeologous exchanges. A detailed example is described in Fig. 3.