Extended Data Fig. 3: Compartments of the oat pangenome.

a, Number of genes predicted for the respective oat line, detailed by subgenome. b, Completeness of gene predictions assessed by BUSCO counts. c, The bar chart shows the number of genes (y-axis) found in orthologous groups consisting of one oat line (cloud; red), between two and twenty-nine oat lines (shell; turquoise) or thirty oat lines (core; orange) (x-axis). The pie chart provides the overall ratios of genes in the core-, shell- and cloud-genome categories. d, Ratios of genes in the core-, shell- and cloud-genome categories detailed for each oat line. e, Gene-expression counts as Log TPM values for the core-, shell- and cloud- genes and six different tissues.