Extended Data Fig. 3: Co-expression network of rice CESA genes and ERF transcription factor phylogeny.
From: Ethylene modulates cell wall mechanics for root responses to compaction
a, Co-expression network centered on primary wall CESA genes (represented by orange squares) in rice. Nodes of various colours and shapes correspond to genes from different gene families. Edges indicate significant co-expression relationships between CESAs and the genes represented by the nodes. Network was generated, truncated reformatted from co-expression tool PlaNeT (Mutwil et al.38) using OsCESA8 as bait gene. b, A phylogenetic tree of selected subclades of rice and Arabidopsis ERFs. OsERF34, which binds to the promoters of seven cellulose biosynthesis genes, and OsERF39, are both close homologs of AtERF35, a major primary cell wall regulator in Arabidopsis.
