Extended Data Fig. 2: Aggregate peak analysis of different chromatin loop sets across platforms.
From: An integrated view of the structure and function of the human 4D nucleome
Contact maps at 25-kb resolution were used. a. High-confidence loops detected by at least two platforms in each cell line. b. Pol2 ChIA-PET loops in each cell line. c. Loops uniquely detected by Pol2 ChIA-PET. d. Random control loops for Pol2 ChIA-PET-unique loops. For each Pol2 ChIA-PET-unique loop, control loops are defined by considering interactions between each anchor and loci positioned at the same genomic distance on the opposite side.
