Supplementary Figure 1: Alignment of the SWEET11 promoter sequences from selected rice varieties. | Nature Biotechnology

Supplementary Figure 1: Alignment of the SWEET11 promoter sequences from selected rice varieties.

From: Diagnostic kit for rice blight resistance

Supplementary Figure 1

Rice varieties having nucleotide variations in the PthXo1 EBE were identified using RiceVarMap v.2 (http://ricevarmap.ncpgr.cn/v2/). Two varieties were selected for each variation type as representative. Sequences of the first 400 bp of SWEET11 promoters of the selected varieties were extracted from the 3K database (http://snp-seek.irri.org/). Alignment was done using ClustalW (v 2.1) in Geneious 11.1.5 (https://www.geneious.com). One A/G variation was found in the PthXo1 EBE. Variation was observed with a frequency of 0.2% in 4,726 rice varieties.

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