Extended Data Fig. 3: tSNE of full, non-downsampled data. | Nature Biotechnology

Extended Data Fig. 3: tSNE of full, non-downsampled data.

From: Systematic benchmarking of single-cell ATAC-sequencing protocols

Extended Data Fig. 3: tSNE of full, non-downsampled data.

Datapoints were randomly shuffled before plotting. a, Non-harmony-corrected tSNE of non-downsampled data, colored by technology of origin, cell type and donor identity. b, Harmony-corrected (by technology, considering 10x v1, 1.1, 2 as a single technology) tSNE of non-downsampled data, colored by technology of origin, cell type and donor identity.

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