Supplementary Figure 12: Principal component analysis of sequencing-quality statistics. | Nature Genetics

Supplementary Figure 12: Principal component analysis of sequencing-quality statistics.

From: Germline de novo mutation clusters arise during oocyte aging in genomic regions with high double-strand-break incidence

Supplementary Figure 12

The quality control variables are described in Supplementary Table 18. (a) First two principal components plotted against each other and colored by software version of data analysis pipeline. Spearman-correlation coefficient of PC1 and average coverage: −0.893. (b) Variance explained by principal components. (c) Principal components two and three plotted against each other and colored by estimated ancestry of sequenced individual.

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