Supplementary Figure 10: Analysis of chromatin contacts between actively transcribed HERV-Hs. | Nature Genetics

Supplementary Figure 10: Analysis of chromatin contacts between actively transcribed HERV-Hs.

From: Transcriptionally active HERV-H retrotransposons demarcate topologically associating domains in human pluripotent stem cells

Supplementary Figure 10

(a) Heatmap showing the contact matrix between the HERV-H1 locus and LINC00458/HBL1 locus. There is no visible chromatin contact between the two loci. (b) Heatmap shows the averaged and normalized (scaled and centered to zero) contact frequencies among each pair of HERV-H loci with RPKM greater than 1 (N=122). X-axis and y-axis show the genomic regions ±40kb surrounding HERV-H.

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