Supplementary Fig. 2: Overview of ATAC-seq and RNA-seq data. | Nature Genetics

Supplementary Fig. 2: Overview of ATAC-seq and RNA-seq data.

From: Landscape of stimulation-responsive chromatin across diverse human immune cells

Supplementary Fig. 2: Overview of ATAC-seq and RNA-seq data.

a, Enrichment of ATAC-seq reads relative to RefSeq TSSs for B cells (top) and CD4+ T cells (bottom). b, Examples of gene expression across lineages, y-axis represents log2 (count per million (CPM)). c, Correlogram of Pearson’s R2 for ATAC (left) and RNA (right) for all overlapping samples. d, RNA-seq tSNE of batch corrected read count matrix at protein coding genes. Samples sizes can be found in Supplementary Table 1.

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