Fig. 1: Chromosomal features and functional and synteny landscape of the yellow-seeded B. juncea var. SY genome.
From: Genomic insights into the origin, domestication and diversification of Brassica juncea
Tracks from outer (a) to inner (h) rings indicate the following: a, Chromosome size with units in Mb; b, Density of centromere-specific repeats in 5-Mb bins; c, Density of HC genes in 5-Mb bins; d, Expression of HC genes from nine tissues, calculated as the fragments per kilobase of transcript per million mapped reads (FPKM) in 5-Mb bins and normalization of FPKM by log10(FPKM + 1). e, LTR/Gypsy density (Gypsy length/5 Mb). f, LTR/Copia density (Copia length/5 Mb). g, DNA retrotransposon density (DNA retrotransposon length/5 Mb). h, Location of known genes (Supplementary Table 5) for major phenotypic traits. Lines in the center linking different chromosomal regions show the syntenic relationships between the A and B subgenomes.
