Extended Data Fig. 6: Identification of candidate genes for stem tuber formation in stem mustard.
From: Genomic insights into the origin, domestication and diversification of Brassica juncea
a, Genome-wide distribution of selective sweeps in stem mustard for stem tuber formation. b, Haplotypes for the candidate gene GRF7 (BjuA05g02460S) in stem mustard (T) and leaf mustard (I). c, Haplotypes for the candidate gene IAA33 (BjuA10g12920S) in stem mustard (T) and leaf mustard (I). d, The expression levels of GRF7 and IAA33 in non-stem mustard, stem mustard (one week after the stem swelled, three weeks after the stem swelled) (from left to right) were estimated based on FPKM values. In box plots, the center lines indicate the median values and the bottom and top edges of the box indicate the 25th and 75th percentiles, respectively. Whiskers extend to data no more than 1.5 times the interquartile range, and remaining data are indicated by dots. p-value was calculated using two-sided t-test. Scale bars, 2 cm.
