Table 1 Statistics of the Kariega genome assembly and annotation
From: Long-read genome sequencing of bread wheat facilitates disease resistance gene cloning
Genomic feature | Value |
|---|---|
Length of HiFi assembly | 14.66 Gb |
Number of contigs | 5,055 |
Length of contig N50 | 30.22 Mb |
Length of contig N90 | 5.5 Mb |
Length of hybrid assemblya | 14.68 Gb |
Length of hybrid scaffolds | 14.46 Gb |
Number of hybrid scaffolds | 324 |
Length of hybrid scaffold N50 | 204.26 Mb |
Gap size | 18.8 Mb (0.13%) |
Length of pseudomolecule assembly | 14.68 Gb |
Total length of anchored pseudomolecules | 14.45 Gb |
Number of anchored hybrid scaffolds or contigs | 717 |
Gap size | 11.6 Mb (0.08%) |
Number of high-confidence genes | 110,383 |
Total length of unanchored chromosome | 224.01 Mb |
Number of unanchored hybrid scaffolds or contigs | 3,910 |
Gap size | 8.1 Mb (3.6%) |
Number of high-confidence genes | 6,455 |
BUSCO | |
Complete | 99.4% |
Duplicated | 96.3% |
Fragmented | 0.1% |
Missing | 0.5% |
