Extended Data Fig. 9: The contact heatmaps and browser snapshots of 24 loci containing 27 SNPs associated with both allelic CTCF binding and allelic DNA looping. | Nature Genetics

Extended Data Fig. 9: The contact heatmaps and browser snapshots of 24 loci containing 27 SNPs associated with both allelic CTCF binding and allelic DNA looping.

From: DeepLoop robustly maps chromatin interactions from sparse allele-resolved or single-cell Hi-C data at kilobase resolution

Extended Data Fig. 9: The contact heatmaps and browser snapshots of 24 loci containing 27 SNPs associated with both allelic CTCF binding and allelic DNA looping.

For each SNP, the paternal (blue) and maternal (red) genotypes are included. The allelic loops are circled in the heatmaps. The CTCF motif orientation are indicated with triangles. The height of browser tracks indicating the raw counts of ChIP-seq.

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