Extended Data Fig. 5: Principal component analysis and haplotype of eight large inversions.
From: Genome sequencing reveals evidence of adaptive variation in the genus Zea
Each group of plots contains a dotplot showing the principal component analysis of SNPs in the inversion region and a heatmap showing genotypes at the inversion identified by invClust116. Each point in the dotplot represents a sample and the color represents the inversion haplotypes. Each row in the heatmap represents the genotyped window used in invClust (500 kb) and each column represents a sample. The bar above the heatmap also shows the inversion cluster identified by PCA.
