Extended Data Fig. 4: Characteristics of immune-related structure cells in zebrafish, Drosophila, and earthworm. | Nature Genetics

Extended Data Fig. 4: Characteristics of immune-related structure cells in zebrafish, Drosophila, and earthworm.

From: Deep learning of cross-species single-cell landscapes identifies conserved regulatory programs underlying cell types

Extended Data Fig. 4: Characteristics of immune-related structure cells in zebrafish, Drosophila, and earthworm.

(a) Ridge plots showing the scale normalized expression levels of known zebrafish epithelial markers and immune-related markers in zebrafish epithelial cells. (b) Ridge plots showing the the scale normalized expression levels of known Drosophila MT markers and immune-related markers in Drosophila MT cells (C34 and C69). (c) Ridge plots showing the scale normalized expression levels of two earthworm immune-related markers, evm.TU.Chr04.2499 and evm.TU.ctg2984.2 in earthworm coelomocytes (earthworm C0, C5, C6, C16, C19, C30, C32, C35, and C37). (d-e) t-SNE visualization of 11 subtypes of MT cells from Drosophila C34 and C69, and violin plot showing the scale normalized expression levels of representative markers for each subtype (e).

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