Extended Data Fig. 5: Performance of SHAPEIT5 phasing confidence score.
From: Accurate rare variant phasing of whole-genome and whole-exome sequencing data in the UK Biobank
Switch Error Rate (SER, y-axis) for WGS (a) and WES (c) datasets stratified by minor allele count (x-axis) at different phasing confidence score thresholds. Number of heterozygous sites filtered out at different phasing confidence score thresholds in the WGS (b) and WES (d) datasets. Filtering for a confidence score of 0.5 is equivalent to no filtering.
