Fig. 5: Comparison between 1 M HapMap3 SNPs and 7 M imputed SNPs for the improvement in prediction accuracy for SBayesRC using annotations relative to SBayesRC without annotations. | Nature Genetics

Fig. 5: Comparison between 1 M HapMap3 SNPs and 7 M imputed SNPs for the improvement in prediction accuracy for SBayesRC using annotations relative to SBayesRC without annotations.

From: Leveraging functional genomic annotations and genome coverage to improve polygenic prediction of complex traits within and between ancestries

Fig. 5

Results are from the ten-fold cross-validation in the unrelated UKB samples of European ancestry. Dot shows the mean relative prediction accuracy, and bar shows the standard error estimated from the cross-validation. Color shows trait category; the definitions for the trait acronyms are provided in Supplementary Table 1.

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