Fig. 1: Transcript diversity and classification.
From: A barley pan-transcriptome reveals layers of genotype-dependent transcriptional complexity
a, Five tissues sampled (clockwise from top left) are as follows: embryo, mesocotyl and seminal roots (from here referred to as ‘embryonic’ tissue), seedling root, caryopsis, developing inflorescence and seedling shoot. b, An MDS plot of the overall transcript abundance data. Different colors represent different tissues as indicated. c, The percentage of different gene classifications (core, shell and cloud genes with single or multiple copies) in PanBaRT20. d, Average mapping rates of 14 (HOR8148) and 15 (remaining genotypes) samples for the RNA-seq data from different cultivars to the three transcriptomes (PanBaRT20, respective GsRTDs and BaRTv2). The lines within the boxes display the median, with the box bounds representing the 25th and 75th percentiles. The whiskers extend to the minimum and maximum values within the 1.5× interquartile range. Data points outside this range are outliers.
