Table 1 Clinical features of individuals with RNU4-2 variants according to the location of the variants in the different U4 functional domains

From: Dominant variants in major spliceosome U4 and U5 small nuclear RNA genes cause neurodevelopmental disorders through splicing disruption

Parameters

Total

n.64_65insT

n.76C>T

Other variants in the T-loop or RBM42 interaction region

Other variants in the stem III

Patients

146a

106

10

20

9

 With clinical data

143a

103

10

20

9

Prenatal findings

70/125 (56%)

55/92 (60%)

3/10 (30%)

9/17 (53%)

3/6 (50%)

 IUGR

41/131 (31.3%)

28/94 (30%)

1/9 (11%)

9/20 (45%)

3/8 (38%)

 Cerebral abnormalities

29/91 (31.87%)

27/82 (33%)

0/1 (0%)

2/6 (33%)

0/2 (0%)

Neonatal findings

115/140 (82.14%)

93/102 (91%)

2/10 (20%)

17/20 (85%)

3/8 (38%)

 Neonatal hypotonia

88/138 (63.77%)

71/100 (71%)

0/10 (0%)

15/20 (75%)

2/8 (25%)

 Neonatal feeding problems

73/138 (52.9%)

58/101 (57%)

1/10 (10%)

12/19 (63%)

2/8 (25%)

Congenital microcephaly

30/122 (24.59%)

24/87 (28%)

1/9 (11%)

3/19 (16%)

2/7 (29%)

Microcephaly

97/141 (68.79%)

76/103 (74%)

3/10 (30%)

15/19 (79%)

3/9 (33%)

Short stature

72/140 (51.43%)

61/102 (60%)

1/10 (10%)

9/19 (47%)

1/9 (11%)

Walking

Not achieved

16/115 (13.91%)

11/83 (13%)

0/10 (0%)

5/13 (38%)

0/9 (0%)

Delay

82/115 (71.3%)

65/83 (78%)

6/10 (60%)

7/13 (54%)

4/9 (44%)

Normal age

17/115 (14.78%)

7/83 (8%)

4/10 (40%)

1/13 (8%)

5/9 (56%)

Language ability

Nonverbal

61/116 (52.59%)

52/85 (61%)

0/10 (0%)

9/12 (75%)

0/9 (0%)

Few words

31/116 (26.72%)

29/85 (34%)

0/10 (0%)

1/12 (8%)

1/9 (11%)

Simple sentences

16/116 (13.79%)

3/85 (4%)

6/10 (60%)

1/12 (8%)

6/9 (67%)

Normal

8/116 (6.9%)

1/85 (1%)

4/10 (40%)

1/12 (8%)

2/9 (22%)

Developmental delay

Severe

87/134 (64.93%)

73/99 (74%)

0/9 (0%)

13/18 (72%)

1/8 (12%)

Moderate

37/134 (27.61%)

24/99 (24%)

4/9 (44%)

5/18 (28%)

4/8 (50%)

Mild

9/134 (6.72%)

2/99 (2%)

5/9 (56%)

0/18 (0%)

2/8 (25%)

No

1/134 (0.75%)

0/99 (0%)

0/9 (0%)

0/18 (0%)

1/8 (12%)

Estimated level of ID

Severe

73/112 (65.18%)

61/78 (78%)

0/8 (0%)

12/17 (71%)

0/9 (0%)

Moderate

31/112 (27.68%)

16/78 (21%)

4/8 (50%)

5/17 (29%)

6/9 (67%)

Mild

8/112 (7.14%)

1/78 (1%)

4/8 (50%)

0/17 (0%)

3/9 (33%)

Autism spectrum disorder

52/92 (56.52%)

43/69 (62%)

2/7 (29%)

5/11 (45%)

2/5 (40%)

Epilepsy

81/140 (57.86%)

57/102 (56%)

6/10 (60%)

11/19 (58%)

7/9 (78%)

 Febrile seizures

56/81 (69.14%)

40/60 (67%)

8/8 (100%)

4/7 (57%)

4/6 (67%)

 Status epilepticus

20/68 (29.41%)

17/51 (33%)

0/5 (0%)

3/9 (33%)

0/3 (0%)

 Drug-resistance

12/72 (16.67%)

10/52 (19%)

0/6 (0%)

2/8 (25%)

0/6 (0%)

Abnormal brain MRI

107/130 (82.31%)

89/98 (91%)

1/7 (14%)

15/18 (83%)

2/7 (29%)

  Enlarged ventricles

58

54

0

4

0

 Corpus callosum abnormality

66

53

1

11

1

Cardiac abnormalities

21/112 (18.75%)

15/85 (18%)

1/8 (12%)

4/14 (29%)

1/5 (20%)

Renal/genitourinary abnormalities

24/110 (21.82%)

17/83 (20%)

1/5 (20%)

5/16 (31%)

1/6 (17%)

Bone/skeletal anomalies

42/123 (34.15%)

35/92 (38%)

1/9 (11%)

4/16 (25%)

2/6 (33%)

Eyes/vision abnormalities

70/124 (56.45%)

59/95 (62%)

0/6 (0%)

7/15 (47%)

4/8 (50%)

Hearing loss

9/125 (7.2%)

6/91 (7%)

0/7 (0%)

3/18 (17%)

0/9 (0%)

Teeth/dental anomalies

19/99 (19.19%)

13/72 (18%)

1/7 (14%)

3/14 (21%)

2/6 (33%)

Skin abnormalities

28/115 (24.35%)

20/84 (24%)

3/7 (43%)

4/17 (24%)

1/7 (14%)

Feeding issues

80/125 (64%)

63/91 (69%)

1/7 (14%)

13/18 (72%)

3/9 (33%)

Failure to thrive

65/126 (51.59%)

51/93 (55%)

2/7 (29%)

10/18 (56%)

2/8 (25%)

Constipation

63/123 (51.22%)

51/90 (57%)

2/8 (25%)

8/18 (44%)

2/7 (29%)

Joint hyperlaxity

46/112 (41.07%)

37/82 (45%)

0/7 (0%)

6/15 (40%)

3/8 (38%)

Acrocyanosis

18/108 (16.67%)

16/79 (20%)

0/6 (0%)

2/16 (12%)

0/7 (0%)

Blood count abnormality

15/93 (16.13%)

13/69 (19%)

0/7 (0%)

1/12 (8%)

1/5 (20%)

  1. A more detailed table with statistical tests is available as Supplementary Table 8.
  2. aOne patient with a variant (n.62T>C) located in stem loop I.