Extended Data Fig. 1: Multiplexed imaging of human TB granulomas.
From: The immunoregulatory landscape of human tuberculosis granulomas
a, Hematoxylin and eosin-stained serial sections of FOVs for MIBI-TOF imaging. b, Multiplexed antibody panel grouped by marker category. c, Grayscale images of endogenous ion signal and proteins in control tissues (tonsil, spleen, placenta). d, Workflow for Deepcell-based segmentation of single cells from multiplexed images. e, Histograms of non-zero signal for all proteins from single-cell data. Blue line represents Gaussian smoothed density fit of histogram. Red line represents automatically identified threshold for marker positivity.
