Extended Data Fig. 8: Cluster annotation panels during treated infection.
From: Profound phenotypic and epigenetic heterogeneity of the HIV-1-infected CD4+ T cell reservoir
(A) Each subplot shows the ADT signal for a specific surface antigen for each cluster as seen in Extended Data Figure 7C. X-axis values are normalized count values as processed via Seurat. (B) Each subplot shows the imputed gene activity score overlaid on the UMAP coordinate space as seen in Extended Data Figure 7C. Gene activity score was calculated by ArchR and imputed using MAGIC to aid in visual interpretation as recommended by ArchR.
