Extended Data Fig. 7: Label Transfer from CITE-seq to TEA-seq.
From: A unified multimodal single-cell framework reveals a discrete state model of hematopoiesis in mice
a, UMAP projections of merged CITE-seq (blue) and TEA-seq (orange) transcriptome profiles prior to harmonypy integration (integration was done separately for corresponding HSC-MPP and MultiLin gates between CITE-seq and TEA-seq). b, Distributions of principal components of CITE-seq (blue) and TEA-seq (orange) (an X denotes the removal of principal component 1 prior to harmonypy integration - ‘run_harmony‘). c, UMAP projections of merged CITE-seq (blue) and TEA-seq (orange) profiles after modified harmonypy algorithm implementation with removal of principal component #1. d-e, Validation of label propagation by pairwise comparison of ranking (Spearman correlation as blue-white-red color scale) of marker genes within each cluster for both HSC/MPP TEA-seq replicates (d) and MultiLin TEA-seq replicates (e). 1 = 0-90*/
