Fig. 3: BACH2OE enhances function of 22/28-S. | Nature Immunology

Fig. 3: BACH2OE enhances function of 22/28-S.

From: BACH2 regulates T cell lineage state to enhance CAR T cell function

Fig.
                                        3: BACH2OE
                                    enhances function of 22/28-S.

a, Schematic of engineering approach using two lentiviral vectors with distinct transduction markers. b, Expression of transgenic BACH2. c, PD1 expression at the end of CAR T cell manufacture. d, Memory subset composition of CAR products at the end of manufacture. Subsets defined as naive cells (TN cells, CD62L+CD45RO), TCM cells (CD62L+CD45RO+), TEM cells (CD62LCD45RO+) or terminal effector (TEff, CD62LCD45RO) cells. c,d, Representing n = 4 donors. e, Normalized expression of lineage-defining proteins quantified by mass cytometry. f, Principal component analysis representing variance in gene expression of CAR T cells at the end of manufacturing (n = 1 donor performed in technical triplicate). g, Heatmap of DEGs across 22/BB-S, 22/28-S and 22/28-S+BACH2OE. h, Lineage signatures of genes upregulated in 22/28-S+BACH2OE compared to 22/28-S as defined in the ImmuneSig database. i, Gene set variation analysis (GSVA) of 22/BB-S, 22/28-S and 22/28-S+BACH2OE using naive, effector and exhausted signatures. j, Survival of Nalm6 over time in co-cultures with CAR T cells. k, Fold CAR T cell expansion on day 6 of co-culture with Nalm6. l, CAR T cell PD1 expression on day 6 of co-culture with Nalm6. m, Representative flow cytometry plots of co-expression of Eomes and TCF1 on day 3 of co-culture. For jm, data represent n = 4 donors. n, BACH2 protein expression after CRISPR-mediated BACH2 disruption in CAR T cells. o, Memory subset composition of CAR T cell products at the end of manufacture. p, Nalm6 survival over time in co-culture with CAR T cells. q, Fold CAR T cell expansion on day 6 of co-culture with Nalm6. For nq, representative data are from n = 2 donors. All data are presented as either individual values or mean values ± s.e.m. P < 0.05, P < 0.01, P < 0.001, P < 0.0001 by two-way ANOVA with Bonferroni’s adjustment for multiple comparisons. PC, principal component. Schematic in a created with BioRender.com.

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