Supplementary Figure 11: Network architecture for MaSIF-search.
From: Deciphering interaction fingerprints from protein molecular surfaces using geometric deep learning
Patches from the target and the corresponding binder or a random patch are fed through convolutional layers, followed by a fully connected layer (FC80). The L2-distance between the resulting descriptors is computed and the neural network is optimized to minimize this distance with respect to binder and maximize it with respect to the random patch.
