Extended Data Fig. 2: ZymoBIOMICS theoretical and imputed ground truth community profiles. | Nature Methods

Extended Data Fig. 2: ZymoBIOMICS theoretical and imputed ground truth community profiles.

From: Emu: species-level microbial community profiling of full-length 16S rRNA Oxford Nanopore sequencing data

Extended Data Fig. 2

The theoretical values are taken from ZymoBIOMICS standard report of relative abundance estimates based on 16S rRNA gene copy numbers (https://files.zymoresearch.com/protocols/_d6305_d6306_zymobiomics_microbial_community_dna_standard.pdf). Truth_ONT and truth_illumina represent the ground truth relative abundances calculated for our ONT and Illumina datasets respectively, as described in the Establishing Ground Truth subsection under Methods.

Back to article page