Extended Data Fig. 4: Family-level relative abundance error heatmap of novel species simulation. | Nature Methods

Extended Data Fig. 4: Family-level relative abundance error heatmap of novel species simulation.

From: Emu: species-level microbial community profiling of full-length 16S rRNA Oxford Nanopore sequencing data

Extended Data Fig. 4

Heatmap of family-level error between ground truth and estimated relative abundances for both the Emu and RDP incomplete databases (missing 35 of the 345 CAMI2 simulated species) with our CAMI2 dataset. Here, darker blue denotes an underestimate by the software, darker red denotes an overestimate, and white represents no error. Color scheme is capped at ±3, resulting in error greater than ±3% observing the maximum error colors. Displayed are the families of the 35 species that were removed from each of the databases.

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