Extended Data Fig. 6: Evaluation of DUP and INV calls in the CHM1 and CHM13 diploid mix benchmark.
From: Cue: a deep-learning framework for structural variant discovery and genotyping
a. Upset plot depicting DUP callset overlaps of short-read and long-read callers (only sets larger than 5 events are displayed for conciseness). Overlaps that include Cue are highlighted in orange. b. Breakdown of DUP calls by consensus with long-read and other short-read callers. c. Upset plot depicting INV callset overlaps of short-read and long-read callers. d. Breakdown of INV calls by consensus with long-read and other short-read callers.
