Extended Data Fig. 7: PCA of BMDMs using only observed data points. | Nature Methods

Extended Data Fig. 7: PCA of BMDMs using only observed data points.

From: Prioritized mass spectrometry increases the depth, sensitivity and data completeness of single-cell proteomics

Extended Data Fig. 7

To evaluate the robustness of our results to uncertainties stemming from missing data, we performed PCA of unimputed BMDM data. The single cells are color-coded by treatment condition, with adjoining PCA plots color-coded by the median relative abundance of proteins corresponding to type I interferon-mediated signaling and phagosome maturation.

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