Extended Data Fig. 3: Refined T-cell clustering and annotation.
From: Time-resolved assessment of single-cell protein secretion by sequencing
(A) T cells from Fig. 2F (left) were re-clustered by their surface marker expression (cell numbers for each new T-cell cluster indicated in bracket, middle). For comparison, the new UMAP plot was colored by the original cell annotation (right). (B) The new T-cell clusters were annotated according to surface protein expression and a panel of selected genes associated with T-cell activation/differentiation. (C) Sankey diagram showing the correspondence between the annotations of the original and new clustering.
