Fig. 1: eSRRF image reconstruction produces high-fidelity images. | Nature Methods

Fig. 1: eSRRF image reconstruction produces high-fidelity images.

From: High-fidelity 3D live-cell nanoscopy through data-driven enhanced super-resolution radial fluctuation

Fig. 1

a, eSRRF processing based on a raw data image stack (raw, left) of a microtubule network allows to surpass the diffraction-limited WF (middle) image resolution and to super-resolve features that were hidden before (eSRRF, right). b, eSRRF reconstruction steps. Each frame in the stack is interpolated (Fourier transform (FT) interpolation (int.)), from which the gradients Gx and Gy are calculated. The corresponding weighting factor map W is created based on the set radius, R. Based on this, the RGC is calculated for each pixel to compute the RGC map. The RGC stack is then compressed into a super-resolution image by cross-correlation (Cn). c, Super-resolved reconstruction images from eSRRF and SRRF obtained from 1,000 frames of high-density fluctuation data (12.1 localizations per frame and µm2), created in silico from an experimental sparse-emitter dataset (DNA-PAINT microscopy of immunolabeled microtubules in fixed COS-7 cells, 0.121 localizations per frame and µm2). The SMLM reconstruction obtained from the sparse data and the WF equivalent are shown for comparison. The number of frames used for reconstruction is indicated in each column (FRC resolution estimate, SMLM 71 ± 2 nm, eSRRF 84 ± 11 nm, SRRF 112 ± 40 nm, WF 215 ± 20 nm). Scale bars, 1 µm (a, and insets in c) and 5 µm (c, left). FRC is shown as mean ± s.d.

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