Extended Data Fig. 4: Data quality of kidney disease cohort. | Nature Methods

Extended Data Fig. 4: Data quality of kidney disease cohort.

From: UDA-seq: universal droplet microfluidics-based combinatorial indexing for massive-scale multimodal single-cell sequencing

Extended Data Fig. 4

a. The violin plot illustrates the distribution of gene numbers per cell (top) and FRiP per cell (middle) across donors in the kidney disease cohort. The bottom panel showing the number of cells corresponding to each donor. Box plots show interquartile range with the median marked. The whiskers extend up to 1.5 times the interquartile range, the outliers are not displayed. b. Violin plot displaying the distribution of TSS (Transcriptional Start Sites) enrichment scores per cell across donors in each channel. Box plots show interquartile range with the median marked. The whiskers extend up to 1.5 times the interquartile range, the outliers are not displayed. c. A violin plot illustrating the distribution of fragment numbers (base 10 logarithms) per cell across donors in each channel. d. UMAP embedding color-coded by channel.

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