Extended Data Fig. 1: Overview of the design for the feature selection benchmarking study. | Nature Methods

Extended Data Fig. 1: Overview of the design for the feature selection benchmarking study.

From: Feature selection methods affect the performance of scRNA-seq data integration and querying

Extended Data Fig. 1: Overview of the design for the feature selection benchmarking study.

The methods to be evaluated are applied to each dataset and integration is performed. The query dataset is then mapped to the integrated reference. Different metrics are applied to assess batch correction, biological conservation, mapping quality, label transfer and unseen population detection.

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