Table 1 Base-wise phase F1 statistics for test species, summarized as the mean value per group

From: Helixer: ab initio prediction of primary eukaryotic gene models combining deep learning and a hidden Markov model

Group

HelixerBW

HelixerPost

GeneMark-ES

AUGUSTUSa

Fungi

0.9514

0.9540

0.9466

0.9221

Plants

0.8001

0.8099

0.4089

0.6300

Vertebrates

0.8641

0.8829

0.2326

0.6372

Invertebrates

0.8458

0.8562

0.7172

0.7914

  1. The highest performing tool for each group is highlighted in bold.
  2. aFor AUGUSTUS, pretrained models were only available for 4 of the 13 plant, 1 of the 11 vertebrate and 5 of the 15 invertebrate test species. All reported summary statistics reflect only those species.
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