Extended Data Fig. 3: Averaged frequencies of ions in ECD, EID and UVPD data per enzyme. | Nature Methods

Extended Data Fig. 3: Averaged frequencies of ions in ECD, EID and UVPD data per enzyme.

From: Integration of alternative fragmentation techniques into standard LC-MS workflows using a single deep learning model enhances proteome coverage

Extended Data Fig. 3: Averaged frequencies of ions in ECD, EID and UVPD data per enzyme.The alternative text for this image may have been generated using AI.

Heatmap of average proportions of fragment ion peaks of different types among all annotated peaks in ECD, EID, HCD, and UVPD spectra plotted per enzyme, not reflecting relative ion intensities. Annotation was performed for 10 ion types: a, a + 1, b, c-1, c, x, x + 1, y, z, z + 1.

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