Extended Data Fig. 2: Cell subtype annotation across cell types.
From: Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions
a, Oligodendrocytes (OL), b, Oligodendrocyte Precursor Cells (OPC), c, Myeloid cells (MC), d, Endothelial cells (EC). For each cell type: original UMAP colored by the given cell type and cell subtype name abbreviations (left); UMAP colored by cell subtypes (center left); dot plot of averaged z-transformed gene expression of marker genes for each cell subtype (center right); proportion of nuclei per condition and snRNA-seq sample grouped by cell subtype (right).
