Table 1 Data collection and refinement statistics
From: De novo design of obligate ABC-type heterotrimeric proteins
| Â | DHT03_2arm_A21/B21/C long | DHT03 | DHT03_1arm_A21/B/C |
|---|---|---|---|
Data collection | |||
Space group | P1 | P1 | P1 |
Cell dimensions | |||
 a, b, c (Å) | 59.47, 68.05, 98.99 | 37.25, 39.92, 50.42 | 55.73, 73.5, 97.28 |
 α, β, γ (°) | 106.461, 108.516, 93.086 | 88.974, 105.789, 115.319 | 73.422, 82.919, 80.781 |
Resolution (Å) | 45.87–3.35 (3.47–3.35)a | 48.21–2.10 (2.175–2.1)a | 49.01–3.35 (3.47–3.35)a |
Total observations | 35,399 (3,655)a | 22,444 (919)a | 37,099 (3,840)a |
Unique reflections | 18,621 (1,887)a | 11,814 (500)a | 19,545 (1,994)a |
Redundancy | 1.9 (1.9)a | 1.9 (1.8)a | 1.9 (1.9)a |
Completeness (%) | 76.72 (60.34)a | 73.95 (24.42)a | 84.33 (71.67)a |
Rmeas | 0.09258 (1.532)a | 0.0573 (1.003)a | 0.1078 (1.082)a |
I/σ(I) | 6.5 (0.78)a | 8.68 (0.95)a | 6.88 (1.01)a |
CC1/2 | 0.998 (0.554)a | 0.994 (0.646)a | 0.998 (0.431)a |
Refinement | |||
Resolution (Å) | 45.87–3.35 | 48.21–2.10 | 49.01–3.35 |
Reflections (work) | 18,614 | 11,814 | 19,543 |
Reflections (test) | 751 | 1,094 | 1,772 |
Rwork/Rfree (%) | 29.47/32.69 | 22.61/27.26 | 24.91/30.51 |
Average B-factor (Ã…2) | 133.68 | 75.62 | 98.69 |
Number of atoms | |||
Protein | 5,365 | 1,913 | 11,098 |
Water | 0 | 5 | 0 |
Ramachandranb | |||
Favored (%) | 100 | 98.65 | 98.91 |
Outliers (%) | 0 | 0 | 0.15 |
Rotamersb | |||
Favored (%) | 96.67 | 97.31 | 96.47 |
Outliers (%) | 0.53 | 0 | 0.25 |
RMSDs | |||
Bond lengths (Ã…) | 0.002 | 0.002 | 0.002 |
Bond angles (°) | 0.88 | 0.38 | 0.37 |
Molprobityb | |||
Molprobity score | 1.32 | 1.19 | 1.31 |
Percentile | 100th | 100th | 100th |
Clashscore | 5.91 | 4 | 5.68 |
Percentile | 100th | 99th | 100th |
PDB ID | |||