Table 1 Statistics of the transcriptomic data using RNA-seq pipeline used in this study.
Sample | Number of raw reads | GC % | Read Length | Trimmed reads | Percentage of clean reads | Mapped Reads | Percentage of mapped reads | Number of Uniquely mapped reads | Percent uniquely mapped | Accession |
|---|---|---|---|---|---|---|---|---|---|---|
PI518671_treatment_SCN_30d_R1 | 29,875,777 | 44 | 99 | 29,868,305 | 99.97% | 26,306,640 | 88.1 | 24,916,413 | 83.4 | SRR8427366 |
PI518671_treatment_SCN_30d_R2 | 20,569,129 | 45 | 99 | 20,564,513 | 99.98% | 18,327,957 | 89.1 | 17,356,148 | 84.4 | SRR8427367 |
PI518671_treatment_SCN_30d_R3 | 23,663,582 | 44 | 99 | 23,657,909 | 99.98% | 20,899,976 | 88.3 | 19,646,683 | 83.0 | SRR8427368 |
PI518671_treatment_Aphid_30d_R1 | 24,553,476 | 45 | 99 | 24,546,368 | 99.97% | 21,032,002 | 85.7 | 19,429,157 | 79.2 | SRR8427369 |
PI518671_treatment_Aphid_30d_R2 | 25,372,180 | 45 | 99 | 25,364,647 | 99.97% | 22,011,320 | 86.8 | 19,706,012 | 77.7 | SRR8427362 |
PI518671_treatment_Aphid_30d_R3 | 37,691,731 | 44 | 99 | 37,682,590 | 99.98% | 31,646,750 | 84.0 | 29,865,320 | 79.3 | SRR8427363 |
PI518671_treatment_SCNAphid_30d_R1 | 23,727,017 | 45 | 99 | 23,721,761 | 99.98% | 21,457,335 | 90.5 | 20,276,187 | 85.5 | SRR8427364 |
PI518671_treatment_SCNAphid_30d_R2 | 22,378,982 | 44 | 99 | 22,373,777 | 99.98% | 19,622,486 | 87.7 | 18,602,604 | 83.1 | SRR8427365 |
PI518671_treatment_SCNAphid_30d_R3 | 27,673,846 | 44 | 99 | 27,668,291 | 99.98% | 23,304,305 | 84.2 | 22,080,120 | 79.8 | SRR8427370 |
MN1806CN_treatment_SCN_30d_R1 | 25,200,882 | 43 | 99 | 25,192,664 | 99.97% | 18,589,872 | 73.8 | 17,402,401 | 69.1 | SRR8427371 |
MN1806CN_treatment_SCN_30d_R2 | 22,192,100 | 43 | 99 | 22,186,459 | 99.97% | 18,350,922 | 82.7 | 17,417,979 | 78.5 | SRR8427383 |
MN1806CN_treatment_SCN_30d_R3 | 20,653,286 | 43 | 99 | 20,648,111 | 99.97% | 15,975,636 | 77.4 | 15,083,771 | 73.1 | SRR8427384 |
MN1806CN_treatment_Aphid_30d_R1 | 20,903,446 | 44 | 99 | 20,896,290 | 99.97% | 17,025,027 | 81.5 | 15,982,207 | 76.5 | SRR8427385 |
MN1806CN_treatment_Aphid_30d_R2 | 21,708,115 | 44 | 99 | 21,701,712 | 99.97% | 16,458,081 | 75.8 | 15,472,937 | 71.3 | SRR8427386 |
MN1806CN_treatment_Aphid_30d_R3 | 26,617,069 | 44 | 99 | 26,610,582 | 99.98% | 22,222,510 | 83.5 | 21,021,087 | 79.0 | SRR8427387 |
MN1806CN_treatment_SCNAphid_30d_R1 | 19,498,275 | 43 | 99 | 19,491,491 | 99.97% | 15,139,964 | 77.7 | 14,203,387 | 72.9 | SRR8427388 |
MN1806CN_treatment_SCNAphid_30d_R2 | 27,765,044 | 44 | 99 | 27,759,095 | 99.98% | 22,021,174 | 79.3 | 20,747,251 | 74.7 | SRR8427389 |
MN1806CN_treatment_SCNAphid_30d_R3 | 43,325,617 | 44 | 99 | 43,312,161 | 99.97% | 33,076,203 | 76.4 | 29,935,328 | 69.1 | SRR8427390 |
MN1806CN_treatment_control_30d_R1 | 24,104,763 | 45 | 99 | 24,099,789 | 99.98% | 18,112,259 | 75.2 | 17,132,109 | 71.1 | SRR8427391 |
MN1806CN_treatment_control_30d_R2 | 32,183,362 | 44 | 99 | 32,174,938 | 99.97% | 26,274,456 | 81.7 | 24,162,028 | 75.1 | SRR8427392 |
PI518671_treatment_control_30d_R1 | 20,522,473 | 44 | 99 | 20,518,044 | 99.98% | 17,937,163 | 87.4 | 17,022,590 | 83.0 | SRR8427405 |
PI518671_treatment_control_30d_R2 | 28,600,503 | 44 | 99 | 28,593,731 | 99.98% | 25,409,842 | 88.9 | 24,045,140 | 84.1 | SRR8427404 |
PI518671_treatment_control_30d_R3 | 20,577,190 | 44 | 99 | 20,570,977 | 99.97% | 17,574,516 | 85.4 | 16,585,012 | 80.6 | SRR8427407 |
PI518671_treatment_SCN_5d_R1 | 20,389,378 | 44 | 99 | 20,383,629 | 99.97% | 17,826,706 | 87.5 | 16,736,123 | 82.1 | SRR8427406 |
PI518671_treatment_SCN_5d_R2 | 10,518,888 | 44 | 99 | 10,516,365 | 99.98% | 9,444,170 | 89.8 | 8,950,048 | 85.1 | SRR8427401 |
PI518671_treatment_SCN_5d_R3 | 21,303,947 | 44 | 99 | 21,298,111 | 99.97% | 18,909,955 | 88.8 | 17,897,118 | 84.0 | SRR8427400 |
PI518671_treatment_Aphid_5d_R1 | 20,262,293 | 45 | 99 | 20,256,610 | 99.97% | 18,157,064 | 89.6 | 16,851,551 | 83.2 | SRR8427403 |
PI518671_treatment_Aphid_5d_R2 | 51,680,716 | 44 | 99 | 51,666,055 | 99.97% | 45,293,720 | 87.7 | 42,794,964 | 82.8 | SRR8427402 |
PI518671_treatment_Aphid_5d_R3 | 20,328,355 | 44 | 99 | 20,322,387 | 99.97% | 18,171,819 | 89.4 | 17,083,986 | 84.1 | SRR8427399 |
PI518671_treatment_SCNAphid_5d_R1 | 21,569,888 | 44 | 99 | 21,563,432 | 99.97% | 18,502,664 | 85.8 | 17,044,428 | 79.0 | SRR8427398 |
PI518671_treatment_SCNAphid_5d_R2 | 57,520,568 | 44 | 99 | 57,503,170 | 99.97% | 47,902,174 | 83.3 | 45,268,224 | 78.7 | SRR8427381 |
PI518671_treatment_SCNAphid_5d_R3 | 16,889,301 | 45 | 99 | 16,883,954 | 99.97% | 14,700,125 | 87.1 | 13,744,624 | 81.4 | SRR8427382 |
MN1806CN_treatment_SCN_5d_R1 | 25,443,012 | 44 | 99 | 25,435,147 | 99.97% | 21,929,527 | 86.2 | 20,483,059 | 80.5 | SRR8427379 |
MN1806CN_treatment_SCN_5d_R2 | 20,043,049 | 45 | 99 | 20,037,212 | 99.97% | 17,551,266 | 87.6 | 16,336,263 | 81.5 | SRR8427380 |
MN1806CN_treatment_SCN_5d_R3 | 9,847,269 | 45 | 99 | 9,844,767 | 99.97% | 8,472,717 | 86.1 | 7,992,925 | 81.2 | SRR8427377 |
MN1806CN_treatment_Aphid_5d_R1 | 20,503,738 | 45 | 99 | 20,497,489 | 99.97% | 16,815,160 | 82.0 | 15,666,380 | 76.4 | SRR8427378 |
MN1806CN_treatment_Aphid_5d_R2 | 14,359,303 | 45 | 99 | 14,355,678 | 99.97% | 12,268,563 | 85.5 | 11,559,112 | 80.5 | SRR8427375 |
MN1806CN_treatment_Aphid_5d_R3 | 19,094,540 | 45 | 99 | 19,088,178 | 99.97% | 16,590,158 | 86.9 | 15,245,807 | 79.9 | SRR8427376 |
MN1806CN_treatment_SCNAphid_5d_R1 | 20,636,498 | 44 | 99 | 20,630,026 | 99.97% | 16,806,607 | 81.5 | 15,865,622 | 76.9 | SRR8427373 |
MN1806CN_treatment_SCNAphid_5d_R2 | 22,488,050 | 44 | 99 | 22,482,625 | 99.98% | 19,286,899 | 85.8 | 18,060,389 | 80.3 | SRR8427374 |
MN1806CN_treatment_SCNAphid_5d_R3 | 22,033,213 | 45 | 99 | 22,028,303 | 99.98% | 16,862,396 | 76.5 | 15,964,103 | 72.5 | SRR8427408 |
MN1806CN_treatment_control_5d_R1 | 18,937,367 | 46 | 99 | 18,932,017 | 99.97% | 14,805,819 | 78.2 | 12,707,453 | 67.1 | SRR8427396 |
MN1806CN_treatment_control_5d_R2 | 26,710,585 | 43 | 99 | 26,702,238 | 99.97% | 20,226,195 | 75.7 | 18,092,239 | 67.8 | SRR8427394 |
MN1806CN_treatment_control_5d_R3 | 21,327,385 | 46 | 99 | 21,320,799 | 99.97% | 16,776,843 | 78.7 | 14,820,338 | 69.5 | SRR8427372 |
PI518671_treatment_control_5d_R1 | 17,242,793 | 45 | 99 | 17,239,066 | 99.98% | 16,044,618 | 93.1 | 14,976,834 | 86.9 | SRR8427397 |
PI518671_treatment_control_5d_R2 | 22,062,929 | 46 | 99 | 22,055,685 | 99.97% | 20,094,996 | 91.1 | 17,347,038 | 78.7 | SRR8427395 |
PI518671_treatment_control_5d_R3 | 21,220,300 | 44 | 99 | 21,213,623 | 99.97% | 19,994,447 | 94.3 | 18,592,042 | 87.6 | SRR8427393 |
