Table 4 Summary of functional annotation results.
Unique | Total | |
|---|---|---|
Trinotate annotations | ||
BBxH* against Uniprot/Sprot | 12 190 | 12 383 |
BBpH** against Uniprot/Sprot | 10 218 | 10 686 |
Pfam hit | 11 227 | 11 817 |
BBxH against NR | 20 556 | 20 637 |
BBpH against NR | 17 198 | 17 776 |
KEGGs mapped | 6 286 | 10 783 |
EggNOGs mapped | 2 717 | 9 241 |
GOs mapped from Uniprot/Sprot hits | 5 919 | 11 925 |
GOs mapped from Pfam hits | 1 224 | 7 337 |
TmHMM | 5 342 | 5 747 |
SignalP | 2 235 | 3 368 |
RNAMMER | 18 | 18 |
Additional annotations | ||
Genes updated by TRAPID/Mercator | — | 6 314 |
GOs mapped by TRAPID/Mercator | — | 18 622 |
OrthoMCL group assigned | 7 893 | 19 339 |
