Fig. 3
From: Proteomic and transcriptomic profiling of aerial organ development in Arabidopsis
Expression profile correlation across developmental stages. (a) Pearson correlation between protein intensity values for the rosette leaf (left panel), the flower (middle panel) and the seed/silique (right panel) growth stages. (b) Pearson correlation between transcript intensity values for the rosette leaf (left panel), the flower (middle panel) and the seed/silique (right panel) growth stages. (c) Pearson correlation between protein intensity values of rosette leaf series one and two with biological replicates of cotyledons and rosette leaves 5, 6, 7, 10, 11 and 12. Batch effect differences between TMT experiments were adjusted with mCombat (see methods). (d) Principal component analysis of the proteins and transcripts identified in all samples of a tissue dataset on both transcript (squares) and protein level (circles) (LF n = 7,563; FL n = 9,138; SQ/EB n = 9,559). Proteome sample stage names are given in blue, transcriptome samples in grey.
