Table 1 Gene assembly and database annotations.
Annotation | Transcripts | Genes | Percentage of annotated genes | ||||
|---|---|---|---|---|---|---|---|
Reference | New | Reference | New | Reference | New | Total | |
NR | 21180 | 15261 | 12890 | 2001 | 93.68% | 44.66% | 81.63% |
Swiss-Prot | 16536 | 10522 | 9703 | 513 | 70.52% | 11.45% | 56.01% |
COG | 19961 | 13503 | 11960 | 1323 | 86.92% | 29.52% | 72.82% |
Pfam | 17852 | 11333 | 10653 | 645 | 77.42% | 14.39% | 61.94% |
GO | 10862 | 6464 | 6733 | 178 | 48.93% | 3.97% | 37.89% |
KEGG | 10863 | 6927 | 6333 | 320 | 46.02% | 7.14% | 36.47% |
Total annotation | 21197 | 15337 | 12902 | 2029 | 93.76% | 45.28% | 81.85% |
Total | 22159 | 19371 | 13760 | 4481 | 100.00% | 100.00% | 100.00% |
