Online Table 3 ChIP-Seq Quality Control Metrics.

From: Epigenomic profiling of neuroblastoma cell lines

ChIP-seq samples

Total number of mapped reads

NSC

RSC

Quality Tag

FRiP

COGN415-H3K27Ac

47176895

1.198422

1.272757

1

0.474845

COGN415-H3K27me3

36536236

1.071534

1.158632

1

0.49757

COGN415-H3K4me1

46916556

1.07441

1.234691

1

0.495989

COGN415-H3K4me3

35108977

1.737172

1.165273

1

0.665681

KELLY-H3K27Ac

40396065

1.149861

1.251872

1

0.535178

KELLY-H3K27me3

40796047

1.061208

0.928446

0

0.527917

KELLY-H3K4me1

40245244

1.098321

1.204422

1

0.6152

KELLY-H3K4me3

39466119

1.591399

1.190163

1

0.654777

LAN5-H3K27Ac

43885147

1.203236

1.20255

1

0.519087

LAN5-H3K27me3

34543494

1.075239

0.97775

0

0.497408

LAN5-H3K4me1

56164251

1.077862

1.15542

1

0.529717

LAN5-H3K4me3

31858899

1.764651

1.176897

1

0.619316

NB1643-H3K27Ac

41742217

1.296535

1.200707

1

0.52952

NB1643-H3K27me3

23005654

1.039613

0.595513

0

0.360867

NB1643-H3K4me1

50897016

1.122099

1.183034

1

0.567832

NB1643-H3K4me3

37634501

1.532691

1.205901

1

0.568343

NB69-H3K27Ac

53900803

1.167153

1.186056

1

0.38709

NB69-H3K27me3

34409193

1.107075

0.980233

0

0.322941

NB69-H3K4me1

42335848

1.123224

1.159933

1

0.568245

NB69-H3K4me3

27850317

2.250138

1.150775

1

0.707439

NBLS-H3K27Ac

50890146

1.179172

1.215066

1

0.505567

NBLS-H3K27me3

35015208

1.09364

1.030182

1

0.489031

NBLS-H3K4me1

46236749

1.10292

1.169135

1

0.570663

NBLS-H3K4me3

50235082

1.553831

1.101005

1

0.559603

NGP-H3K27Ac

38313036

1.361727

1.198959

1

0.568805

NGP-H3K27me3

37472545

1.077646

1.057799

1

0.536769

NGP-H3K4me1

48180227

1.103056

1.186526

1

0.565611

NGP-H3K4me3

36776488

1.560065

1.190639

1

0.604321

SKNAS-H3K27Ac

44588659

1.193814

1.185694

1

0.51158

SKNAS-H3K27me3

35294269

1.097313

1.054037

1

0.509914

SKNAS-H3K4me1

44751199

1.080169

1.217051

1

0.529041

SKNAS-H3K4me3

37205051

1.59864

1.152108

1

0.552572

SKNBE2C-H3K27Ac

41843000

1.321413

1.250426

1

0.519484

SKNBE2C-H3K27me3

38128223

1.05271

1.088533

1

0.372794

SKNBE2C-H3K4me1

40497385

1.085463

1.219962

1

0.43465

SKNBE2C-H3K4me3

35566334

1.624385

1.192349

1

0.555207

SKNFI-H3K27Ac

29596790

1.256625

1.24649

1

0.51058

SKNFI-H3K27me3

43286296

1.050568

0.964636

0

0.404905

SKNFI-H3K4me1

47444355

1.087186

1.189153

1

0.431344

SKNFI-H3K4me3

33682220

1.892165

1.176541

1

0.596417

SKNSH-H3K27Ac

1483696

1.784565

1.831717

2

0.298579

COGN415-NMYC-20171205

29461253

1.147548

1.317602

1

0.335752

KELLY-CMYC-20171205

19638904

1.092233

1.286621

1

0.112855

KELLY-MYCN-20150914

22082714

1.504426

1.186748

1

0.439206

LAN5-NMYC-20171205

29364683

1.242474

1.273926

1

0.460691

NB1643-NMYC-20171205

22694640

1.238667

1.329251

1

0.440359

NB69-CMYC-20171205

28528819

1.117398

1.233859

1

0.13737

NB69-NMYC-20171205

18647527

1.049936

0.852352

0

0.007798

SKNAS-CMYC-20171205

27536490

1.179348

1.250418

1

0.183257

SKNSH-CMYC-20171205

8773023

1.331705

1.19801

1

0.157383

  1. Total number of reads, FRiP score, RSC, and NSC per sample.