Table 1 Sampling protocols and read counts for global Bio-GO-SHIP surface ocean metagenomes.
From: High spatial resolution global ocean metagenomes from Bio-GO-SHIP repeat hydrography transects
Cruise/Year | DNA Collection | DNA Volume | Station Count | Total Reads | Total Bases | Median Bases Per Sample | Range of Bases Per Sample | Total Pre-Filter Reads ≥ Q25 |
|---|---|---|---|---|---|---|---|---|
I07N 2018 | Underway, CTD | 4 L, 2-4 L | 248 | 6.20 × 109 | 9.36 × 1011 | 3.27 × 109 | 2.47 × 108–1.42 × 1010 | 4.65 × 109 |
I09N 2016 | Underway | 10 L | 242 | 5.73 × 109 | 8.64 × 1011 | 3.10 × 109 | 4.71 × 108–1.22 × 1010 | 4.15 × 109 |
C13.5 2020 | Underway | 5-10 L | 229 | 5.94 × 109 | 8.96 × 1011 | 2.94 × 109 | 3.98 × 108–2.14 × 1010 | 4.17 × 109 |
P18 2016-17 | CTD | 2 L | 104 | 3.22 × 109 | 4.86 × 1011 | 4.46 × 109 | 6.14 × 107–1.77 × 1010 | 2.55 × 109 |
AMT-28 2018 | CTD | 2 L | 63 | 2.18 × 109 | 3.29 × 1011 | 4.95 × 109 | 1.62 × 109–1.22 × 1010 | 1.71 × 109 |
NH1418 2014 | CTD | 2 L | 23 | 5.41 × 108 | 8.17 × 1010 | 3.03 × 109 | 2.42 × 109–1.08 × 1010 | 4.02 × 108 |
AE1319 2013 | CTD | 2 L | 13 | 2.01 × 108 | 3.03 × 1010 | 4.69 × 109 | 2.15 × 109–7.43 × 109 | 1.63 × 108 |
BVAL46 2011 | CTD | 2 L | 12 | 2.01 × 108 | 3.04 × 1010 | 2.73 × 109 | 2.33 × 109–4.88 × 109 | 1.61 × 108 |
