Table 4 List of preprocessing steps applied to the custom white matter masks and ROIS, together with web links to relevant software and, if available, brainlife.io Apps.

From: CHIASM, the human brain albinism and achiasma MRI dataset

Preprocessing step

Software/Tool

Software source/App

1. Alignment of the custom mask to T1w image

FSL/flirt

https://www.mrtrix.org

2. Alignment of the ROIs to T1w image

MRtrix/mrtransform

https://www.mrtrix.org

3. Removal of interpolation artifacts

MRtrix/mrthreshold

https://www.mrtrix.org

  1. Web services used to process that are available for reuse on https://brainlife.io/apps.
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