Fig. 3 | Scientific Data

Fig. 3

From: A comprehensive genomic and transcriptomic dataset of triple-negative breast cancers

Fig. 3The alternative text for this image may have been generated using AI.

Quality assessment results of genomics data. (a) Line plot from FastQC presenting sequences of all samples have universally high quality in WES. (b) Box plots representing mapping ratio (%) across all samples of the human genome (left) and of multiple sources (right). (c) Frequency distribution plots representing the median coverage of all samples. (d) Violin plot representing duplication across all samples. And box plots representing (e) median insert size and (f) GC content of the data of all samples per batch (Yellow represents the samples from white blood cells and purple represents samples from tumor tissues). Frequency distribution plots representing quality assessment results of OncoScan CNV data, including (g) MADP score and (h) ndSNPQC score.

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