Table 1 Overview of Immune Signatures Data Resource Study Participants Metadata.
From: The Immune Signatures data resource, a compendium of systems vaccinology datasets
Study Accession | Pathogen (Vaccine Type) | Number of Participants | Number of Samples | Vaccine | Adjuvant | Race | Ethnicity | Cohort | Matrix | Pubmed ID | Geographical Location |
|---|---|---|---|---|---|---|---|---|---|---|---|
SDY1373 | Ebola47 (Recombinant Viral Vector) | 13 | 46 | UKE Phase I rVSV ZEBOV | VSV | Not Specified | Not Specified | dose 20 × 10^6 ofu,dose 3 × 10^6 pfu | SDY1373_WholeBlood_highDose_Geo,SDY1373_WholeBlood_lowDose_Geo | 28854372 | Metropolitan France |
SDY1328 | Hepatitis A/B48 (Inactivated/Recombinant protein) | 164 | 325 | Twinrix | None | White | Not Hispanic or Latino | healthy adults | SDY1328_WholeBlood_HealthyAldults_Geo | 26742691 | Canada |
SDY1291 | HIV49 (Recombinant Viral Vector) | 10 | 50 | Ad5/HIV | AdV | White, Black, or African American | Not Hispanic or Latino | healthy HIV-1-uninfected adults | SDY1291_PBMC_HealthyHIVUninfected_Geo | 23151505 | US: Washington |
SDY1119 | Influenza22 (Inactivated) | 72 | 177 | TIV (2011) | None | Not Specified | Not Specified | young and old type 2 diabetes cohorts | SDY1119_PBMC_youngT2D_Geo, SDY1119_PBMC_youngHealthy_Geo,SDY1119_PBMC_oldHealthy_Geo,SDY1119_PBMC_oldT2D_Geo | 26682988 | US: Georgia |
SDY1276 | Influenza50 (Inactivated) | 218 | 828 | TIV (2008) | None | Not Specified | Not Specified | Validation Cohort; Females 2008-2009 trivalent influenza vaccine,Discovery Cohort; Males 2008?2009 trivalent influenza vaccine | SDY1276_WholeBlood_Validation_Geo,SDY1276_WholeBlood_Discovery_Geo | 21357945 | US: Texas |
SDY180 | Influenza51 (Inactivated) | 12 | 102 | TIV (2009) | None | Asian,Whit e,Black or African American | Not Hispanic or Latino | Study group 2 2009-2010 Fluzone,Study group 1 2009-2010 Fluzone | SDY180_WholeBlood_Grp2Fluzone_G eo,SDY180_WholeBlood_Grp1Fluzone_Geo | 23601689 | US: Texas |
SDY212 | Influenza52 (Inactivated) | 90 | 90 | TIV (2008) | None | Oth er,Wh ite,As ian,American I,ndian or Alaska Native | Not Hispanic or L atino,Hispanic or Latino | Cohort_1,Cohort_2 | SDY212_WholeBlood_Young_Geo,SDY212_PBMC_Young_geo,SDY212_WholeBlood_Older_Geo,SDY212_PBMC_Older_Geo | 23591775 | US: California |
SDY224 | Influenza53 (Inactivated) | 5 | 55 | TIV (2010) | None | White,Black or African American,American Indian or Alaska Native | Not Hispanic or Latino,Hispanic or Latino | TIV 2010 | SDY224_PBMC_TIV2010_ImmPort | 23900141 | US: New York |
SDY269 | Influenza23 (Inactivated) | 28 | 80 | TIV (2008) | None | White,Asian,Black or African American | Not Hispanic or Latino,Hispanic or Latino | TIV Group 2008 | SDY269_PBMC_TIV_Geo | 21743478 | US: Georgia |
SDY270 | Influenza23 (Inactivated) | 28 | 83 | TIV (2009) | None | White,Black or African American,Asian | Not Hispanic or Latino,Hispanic or Latino | TIV Group 2009 | SDY270_PBMC_TIVGroup_Geo | 21743478 | US: Georgia |
SDY400 | Influenza21 (Inactivated) | 30 | 120 | TIV (2012) | None | White,Asian,Black or African American,Other | Not Hispanic or Latino,Hispanic or Latino | Young adults 21-30 years old,Older adults > = 65 years old | SDY400_PBMC_Young_Geo,SDY400_PBMC_Older_Geo | 32060136 | US: Connecticut |
SDY404 | Influenza25 (Inactivated) | 39 | 156 | TIV (2011) | None | White,Unknown,Other,Asian,Black or African American | Not Hispanic or Latino,Hispanic or Latino | Young adults 21-30 years old,Older adults > = 65 years old | SDY404_PBMC_Young_Geo,SDY404_PBMC_Older_Geo | 25596819 | US: Connecticut |
SDY520 | Influenza21 (Inactivated) | 24 | 94 | TIV (2013) | None | White,Asian,Black or African American | Not Hispanic or Latino,Hispanic or Latino | Young adults 21-30 years old,Older adults > = 65 years old | SDY520_WholeBlood_Young_geo,SDY520_WholeBlood_Older_Geo | 32060136 | US: Connecticut |
SDY56 | Influenza22 (Inactivated) | 63 | 288 | TIV (2010) | None | White,Asian,Black or African American | Not Hispanic or Latino,Hispanic or Latino | Healthy adults 25-40 years old receiving TIV flu vaccine,Healthy adults >65 years old receiving TIV flu vaccine | SDY56_PBMC_Young,SDY56_PBMC_Older | 26682988 | US: Georgia |
SDY61 | Influenza23 (Inactivated) | 9 | 27 | TIV (2007) | None | White | Not Hispanic or Latino,Hispanic or Latino | TIV Group 2007 | SDY61_PBMC_TIVGrp | 21743478 | US: Georgia |
SDY63 | Influenza25 (Inactivated) | 19 | 72 | TIV (2010) | None | White,Asian,Other,Black or African American | Not Hispanic or Latino | Young adults 21-30 years old,Older adults > = 65 years old | SDY63_PBMC_Young_Geo,SDY63_PBMC_Older_Geo | 25596819 | US: Connecticut |
SDY640 | Influenza21 (Inactivated) | 20 | 79 | TIV (2014) | None | White,Asian,Unknown | Not Hispanic or Latino,Hispanic or Latino | Young adults 21-30 years old,Older adults > = 65 years old | SDY640_WholeBlood_Young_Geo,SDY640_WholeBlood_Older_Geo | 32060136 | US: Connecticut |
SDY80 | Influenza54 (Inactivated) | 61 | 286 | TIV (2009) + pH1N1 | None | White,Asian,Other,Black or African American | Other,Hispanic or Latino | Cohort2 | SDY80_PBMC_Cohort2_geo | 24725414 | US: Maryland |
SDY269 | Influenza23 (Live attenuated) | 28 | 83 | LAIV (2008) | LAIV | White,Black or African American,Asian | Not Hispanic or Latino,Hispanic or Latino | LAIV group 2008 | SDY269_PBMC_LAIV_Geo | 21743478 | US: Georgia |
SDY1293 | Malaria55 (Recombinant protein) | 44 | 165 | RTS,S/AS01 or RTS,S/AS02 | AS01/AS02 | Not Specified | Not Specified | adjuvanted RTS,S malaria vaccine cohort | SDY1293_PBMC_Vaccinated_geo | 20078211 | US: Maryland |
SDY1260 | Meningococcus33 (Conjugate) | 17 | 51 | MCV4 | None | Not Specified | Not Specified | MCV4 | SDY1260_PBMC_MCV4_Geo | 24336226 | US: Georgia |
SDY1325 | Meningococcus56 (Conjugate) | 5 | 10 | MenACWY-CRM | None | Not Specified | Not Specified | Intramuscular MenACWY-CRM | SDY1325_WholeBlood_IntramuscularCRM_Geo | 28137280 | England |
SDY1260 | Meningococcus33 (Polysaccharide) | 13 | 39 | MPSV4 | None | Not Specified | Not Specified | MPSV4 | SDY1260_PBMC_MPSV4_Geo | 24336226 | US: Georgia |
SDY1325 | Meningococcus56 (Polysaccharide) | 5 | 10 | MenACWY-PS | None | Not Specified | Not Specified | Intramuscular MenACWY-PS | SDY1325_WholeBlood_IntramuscularPS_Geo | 28137280 | England |
SDY180 | Pneumococcus51 (Polysaccharide) | 12 | 101 | Pneumovax23 | None | White,Black or African American,Asian | Not Hispanic or Latino,Hispanic or Latino | Study group 2 Pneunomax23,Study group 1 Pneunomax23 | SDY180_WholeBlood_Grp2Pneunomax23_Geo,SDY180_WholeBlood_Grp1Pneunomax23_Geo | 23601689 | US: Texas |
SDY1370 | Smallpox57 (Live virus) | 4 | 24 | DryVax | Vaccinia | Unknown | Not Specified | DryVax | SDY1370_PBMC_dryvax_geo | 21921208 | US: Massachusetts |
SDY1370 | Smallpox57 (Live virus) | 4 | 24 | LC16m8 | Vaccinia | Unknown | Not Specified | LC16m8 | SDY1370_PBMC_lc16m8_geo | 21921208 | US: Massachusetts |
SDY1364 | Tuberculosis58 (Recombinant Viral Vector) | 12 | 36 | MVA85A | Vaccinia | Not Specified | Not Specified | MVA85A intramuscular | SDY1364_PBMC_IntraMuscular_Geo | 23844129 | England |
SDY984 | Varicella Zoster27 (Live attenuated) | 72 | 288 | Zostavax | VZV | White,Black or African American,Unknown,Asian | Not Hispanic or Latino,Hispanic or Latino | young,elderly | SDY984_PBMC_Young_Geo,SDY984_PBMC_Elderly_Geo | 28502771 | US: Georgia, US: Colorado |
SDY1264 | Yellow Fever19 (Live attenuated) | 25 | 87 | YF17D | YF17D | Not Specified | Not Specified | Trial2,Trial1 | SDY1264_PBMC_Trial2_Geo,SDY1264_PBMC_Trial1_Geo | 19029902 | US: Georgia |
SDY1289 | Yellow Fever18 (Live attenuated) | 25 | 117 | YF17D | YF17D | Not Specified | Not Specified | in vivo vaccination study Montreal adult cohort,in vivo vaccination study Lausanne adult cohort | SDY1289_WholeBlood_MontrealCohort_Geo,SDY1289_WholeBlood_LausanneCohort_Geo | 19047440 | Canada, Switzerland, US: Georgia |
SDY1294 | Yellow Fever59 (Live attenuated) | 21 | 109 | YF17D | YF17D | Asian | Not Hispanic or Latino | Chinese cohort | SDY1294_PBMC_ChineseCohort_Geo | 28687661 | China |
SDY1529 | Yellow Fever18 (Live attenuated) | 36 | 180 | YF17D | YF17D | Black or African American | Not Hispanic or Latino | healthy adults | SDY1529_WholeBlood_HealthyAdults_PreVax_Geo,SDY1529_WholeBlood_HealthyAdults_PostVax_Geo | 19047440 | Uganda |
