Table 1 Clinical characteristics of the samples included in the meta-analysis.
Ref. | GEO accession number | Donor characteristics | Healthy tissue from… | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Serie ( = batch) | Sample | Gender | Age | Smoker | Alcohol use | GFR | IFTA (%) | Serum creatinine (mg/dL) | BUN (mg/dL) | |||
snRNA-seq | Wilson PC, et al.19 | GSE13188226 | GSM3823939 | M | 54 | NA | NA | 58.4 | 1–10 | 1.28 | NA | Non-tumor tissue in a patient undergoing nephrectomy for renal mass |
GSM3823940 | M | 62 | NA | NA | 60.7 | 1–10 | 1.21 | NA | Non-tumor tissue in a patient undergoing nephrectomy for renal mass | |||
GSM3823941 | F | 61 | NA | NA | 68.5 | 1–10 | 0.89 | NA | Non-tumor tissue in a patient undergoing nephrectomy for renal mass | |||
Wu H, et al.20 | GSE11818427 | GSM3320197-8 | M | 62 | NA | NA | NA | NA | 1.03 | 12 | Renal cortex from a nephrectomy | |
Wu H, et al.21 | GSE11415628 | GSM3135714 | M | 70 | NA | NA | NA | NA | 1.10 | NA | Discarded renal donation | |
Muto Y, et al.22 | GSE15130229 | GSM4572195 | M | 50 | NA | NA | 78 | 1–10 | 1.10 | NA | Non-tumor tissue in a patient undergoing nephrectomy for renal mass | |
GSM4572196 | F | 52 | NA | NA | 98 | 1–10 | 0.89 | NA | Non-tumor tissue in a patient undergoing nephrectomy for renal mass | |||
scRNA-seq | Liao J, et al.24 | GSE13168531 | GSM4145204 | M | 57 | Y | Y | NA | NA | NA | NA | Non-tumor tissue in a patient undergoing nephrectomy for clear RCC |
GSM4145205 | F | 59 | N | N | NA | NA | NA | NA | Non-tumor tissue in a patient undergoing nephrectomy for clear RCC | |||
GSM4145206 | M | 65 | Y | N | NA | NA | NA | NA | Non-tumor tissue in a patient undergoing nephrectomy for clear RCC | |||
Zhang Y, et al.23 | GSE15911530 | GSM4819726 | M | 70 | NA | NA | NA | NA | NA | NA | Non-tumor tissue in a patient undergoing a partial nephrectomy for ccRCC | |
GSM4819728 | M | 69 | NA | NA | NA | NA | NA | NA | Non-tumor tissue in a patient undergoing a partial nephrectomy for ccRCC | |||
GSM4819730-1 | F | 65 | NA | NA | NA | NA | NA | NA | / | |||
GSM4819733 | M | 76 | NA | NA | NA | NA | NA | NA | Non-tumor tissue in a patient undergoing a partial nephrectomy for ccRCC | |||
GSM4819735 | M | 74 | NA | NA | NA | NA | NA | NA | Non-tumor tissue in a patient undergoing a partial nephrectomy for ccRCC | |||
Menon R, et al.25 | GSE14098932 | GSM4191941 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |
GSM4191942 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |||
GSM4191943 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |||
GSM4191944 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |||
GSM4191945 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |||
GSM4191946 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |||
GSM4191947 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |||
GSM4191948 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |||
GSM4191949 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |||
GSM4191950 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |||
GSM4191951 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |||
GSM4191952 | NA | NA | NA | NA | NA | NA | NA | NA | Living donor | |||
GSM4191953 | NA | NA | NA | NA | NA | NA | NA | NA | Living donor | |||
GSM4191954 | NA | NA | NA | NA | NA | NA | NA | NA | Living donor | |||
GSM4191955 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |||
GSM4191956 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |||
GSM4191957 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |||
GSM4191958 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |||
GSM4191959 | NA | NA | NA | NA | NA | NA | NA | NA | Non-tumor tissue from a tumor nephrectomy | |||
GSM4191960 | NA | NA | NA | NA | NA | NA | NA | NA | Surveillance biopsy after kidney transplantation | |||
GSM4191961 | NA | NA | NA | NA | NA | NA | NA | NA | Surveillance biopsy after kidney transplantation | |||
GSM4191962 | NA | NA | NA | NA | NA | NA | NA | NA | Surveillance biopsy after kidney transplantation | |||
GSM4191963 | NA | NA | NA | NA | NA | NA | NA | NA | Surveillance biopsy after kidney transplantation | |||
GSM4191964 | NA | NA | NA | NA | NA | NA | NA | NA | Surveillance biopsy after kidney transplantation | |||
